Winterizing Your Recreational Watercraft: What to Do Before Storage

Published on 9/2/2025
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middle aged man powerwashing a jet boat on a trailer

Whether you own a boat, pontoon, or personal watercraft (PWC/jet ski), proper winterization is the key to protecting your investment. Cold Kansas winters can be tough on engines, fuel systems, and hulls. But how much you need to do depends on where you store your watercraft.

⚠️ Important Note: Before you begin, always consult your owner’s manual or manufacturer’s documentation for your specific boat or PWC. Each make and model may have unique requirements for draining, flushing, or engine care. The checklist below is a general guide to common winterization practices, not a replacement for model-specific instructions.

If you choose indoor covered storage, many of the most time-consuming steps can be reduced or skipped. Outdoor storage, on the other hand, demands extra work to guard against snow, ice, and sun.

Step 1: Clear Out & Clean

All Watercraft

  • Remove life jackets, towels, electronics, and gear.

  • Clean compartments and leave them open to prevent trapped moisture.

  • Wash the hull and deck to remove dirt, salt, and grime.

Outdoor Storage Only

  • Wax the exterior to help shield against UV and ice.

Step 2: Drain & Flush Cooling Systems

Boats, Pontoons, and Jet Skis

  • Drain all residual water from the engine and cooling system.

  • Run antifreeze through the system (marine or RV-grade) to prevent freeze damage.

👉 Indoor Storage Note: If your boat or PWC is kept in an unheated but enclosed garage, antifreeze is still necessary because temperatures drop below freezing even indoors.

Step 3: Stabilize Fuel

All Watercraft with Engines

  • Fill the fuel tank and add stabilizer.

  • Run the engine briefly to circulate stabilized fuel.

Step 4: Protect Engine Internals

Boats & PWCs with gasoline engines

  • Spray fogging oil into the carburetor or spark plug holes to coat cylinder walls.

  • Replace spark plugs afterward.

Step 5: Lubricate Moving Parts

All Watercraft

  • Apply marine-grade lubricant to throttle cables, steering components, and exposed metal parts.

Step 6: Battery Care

All Watercraft with batteries

  • Indoor Storage with Power: Leave the battery in place and connect it to a maintainer (AP Garages units have outlets for this).

  • Outdoor or No-Power Storage: Remove the battery and store indoors on a trickle charger.

Step 7: Secure & Cover

Outdoor Storage Only

  • Block exhaust ports with steel wool to prevent pests.

  • Use a breathable cover to protect from snow, UV rays, and ice.

  • Plan to remove snow loads through the season.

Indoor Covered Storage

  • A simple dust cover is sufficient—no need for heavy-duty tarps or snow clearing.

Why Indoor Covered Storage Saves You Work

At All Purpose Garages, indoor enclosed storage for boats and PWCs means:

  • ❌ No need for waxing against UV.

  • ❌ No wrestling with tarps or heavy-duty boat covers.

  • ❌ No snow removal mid-season.

  • ✅ Batteries can stay connected and maintained on trickle power.

  • ✅ Your watercraft stays clean, dry, and ready for a faster spring launch.

The Bottom Line

All boats, pontoons, and PWCs need basic winterization, but indoor covered storage dramatically reduces the workload. If you store outdoors, you’ll spend extra time waxing, covering, and clearing snow. With enclosed storage, you winterize once, plug in your battery, and you’re done—leaving more time for fall activities and ensuring a quick start to next spring’s adventures.

Reserve your enclosed storage today and make winterization easier than ever.

Manufacturer Resources for Model-Specific Guidance

For detailed instructions, always refer to your manufacturer’s owner’s or service manuals. Here are links to the most common watercraft brands:

Boats & Pontoons

  • Bayliner – Access model-year-specific manuals via the “Documents & Manuals” section of the Owners Corner

  • Chaparral Boats – Use myChaparral to download owner’s manuals directly for your model

  • Crest Pontoons – Browse and download owner’s manuals from their Owners site

  • Bennington Pontoons – Find owner’s packets and downloadable PDFs through the Owner Resources page

  • Tracker Boats – Visit the Manuals & Guides section to view operator manuals and documentation

Personal Watercraft

Outboard Engines